Article

Structural basis of tolvaptan binding to the vasopressin V2 receptor

Hong-li Liu1, Hai-yang Zhong1, Yi-xiao Zhang1, Hua-rui Xue1, Zheng-shuo Zhang1, Ke-quan Fu1, Xu-dong Cao1, Xiao-chun Xiong1, Dong Guo1
1 Jiangsu Key Laboratory of New Drug Research and Clinical Pharmacy, Xuzhou Medical University, Xuzhou 221004, China
Correspondence to: Xiao-chun Xiong: xiaochun.xiong@xzhmu.edu.cn, Dong Guo: guo@xzhmu.edu.cn,
DOI: 10.1038/s41401-024-01325-5
Received: 15 April 2024
Accepted: 26 May 2024
Advance online: 20 June 2024

Abstract

The vasopressin V2 receptor (V2R) is a validated therapeutic target for autosomal dominant polycystic kidney disease (ADPKD), with tolvaptan being the first FDA-approved antagonist. Herein, we used Gaussian accelerated molecular dynamics simulations to investigate the spontaneous binding of tolvaptan to both active and inactive V2R conformations at the atomic-level. Overall, the binding process consists of two stages. Tolvaptan binds initially to extracellular loops 2 and 3 (ECL2/3) before overcoming an energy barrier to enter the pocket. Our simulations result highlighted key residues (e.g., R181, Y205, F287, F178) involved in this process, which were experimentally confirmed by site-directed mutagenesis. This work provides structural insights into tolvaptan-V2R interactions, potentially aiding the design of novel antagonists for V2R and other G protein-coupled receptors.

Keywords: vasopressin V2 receptor (V2R); tolvaptan; binding pathway; gaussian accelerated molecular dynamics (GaMD) simulations

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