Article

tRF3-IleAAT reduced extracellular matrix synthesis in diabetic kidney disease mice by targeting ZNF281 and inhibiting ferroptosis

Yun-yang Qiao1,2, Jia-ling Ji2, Wei-ling Hou3, Gao-ting Qu1, Shan-wen Li1, Xing-yue Li1, Ran Jin1, Yin-fang Li1, Hui-min Shi1, Ai-qing Zhang2
1 Department of Pediatric Nephrology, the Second Affiliated Hospital of Nanjing Medical University, Nanjing 210003, China
2 Department of Pediatrics, the Fourth Affiliated Hospital of Nanjing Medical University, Nanjing 210031, China
3 Department of Science and Education, the Affiliated Jiangning Hospital of Nanjing Medical University, Nanjing 211199, China
Correspondence to: Hui-min Shi: shihuimin@njmu.edu.cn, Ai-qing Zhang: njaiqing@njmu.edu.cn,
DOI: 10.1038/s41401-024-01228-5
Received: 26 August 2023
Accepted: 11 January 2024
Advance online: 29 January 2024

Abstract

It is well established that the synthesis of extracellular matrix (ECM) in mesangial cells is a major determinant of diabetic kidney disease (DKD). Elucidating the major players in ECM synthesis may be helpful to provide promising candidates for protecting against DKD progression. tRF3-IleAAT is a tRNA-derived fragment (tRF) produced by nucleases at tRNA-specific sites, which is differentially expressed in the sera of patients with diabetes mellitus and DKD. In this study we investigated the potential roles of tRFs in DKD. Db/db mice at 12 weeks were adapted as a DKD model. The mice displayed marked renal dysfunction accompanied by significantly reduced expression of tRF3-IleAAT and increased ferroptosis and ECM synthesis in the kidney tissues. The reduced expression of tRF3-IleAAT was also observed in high glucose-treated mouse glomerular mesangial cells. We administered ferrostatin-1 (1 mg/kg, once every two days, i.p.) to the mice from the age of 12 weeks for 8 weeks, and found that inhibition of the onset of ferroptosis significantly improved renal function, attenuated renal fibrosis and reduced collagen deposition. Overexpression of tRF3-IleAAT by a single injection of AAV carrying tRF3-IleAAT via caudal vein significantly inhibited ferroptosis and ECM synthesis in DKD model mice. Furthermore, we found that the expression of zinc finger protein 281 (ZNF281), a downstream target gene of tRF3-IleAAT, was significantly elevated in DKD models but negatively regulated by tRF3-IleAAT. In high glucose-treated mesangial cells, knockdown of ZNF281 exerted an inhibitory effect on ferroptosis and ECM synthesis. We demonstrated the targeted binding of tRF3-IleAAT to the 3’UTR of ZNF281. In conclusion, tRF3-IleAAT inhibits ferroptosis by targeting ZNF281, resulting in the mitigation of ECM synthesis in DKD models, suggesting that tRF3-IleAAT may be an attractive therapeutic target for DKD.
Keywords: diabetic kidney disease; extracellular matrix; ferroptosis; tRNA-derived fragments; Zinc finger protein 281; ferrostatin-1

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